Selected Publications

  • Qian C, Wong CC, Swarup S, Chiam K-H (2013).Bacterial Tethering Analysis Reveals a "Run-Reverse-Turn" Mechanism for Pseudomonas Species Motility. Applied Environmental Microbiology 79,4734-4743.

  • Biswas A, Rao R, Umashankar S, Mynampati KC, Reuben S, Parab G, and Swarup S (2011). datPAV--an online processing, analysis and visualization tool for exploratory investigation of experimental data. Bioinformatics 27, 1585-1586.

  • Tao F, Swarup S, and Zhang LH (2010). Quorum sensing modulation of a putative glycosyltransferase gene cluster essential for Xanthomonas campestris biofilm formation. Environmental Microbiology 12, 3159-3170.

  • Tao F, He YW, Wu DH, Swarup S, and Zhang LH (2010). The cyclic nucleotide monophosphate domain of Xanthomonas campestris global regulator Clp defines a new class of cyclic di-GMP effectors. Journal of Bacteriology 192, 1020-1029.

  • Biswas A, Mynampati KC, Umashankar S, Reuben S, Parab G, Rao R, Kannan VS, and Swarup S (2010). MetDAT: a modular and workflow-based free online pipeline for mass spectrometry data processing, analysis and interpretation. Bioinformatics 26, 2639-2640.

  • Ravichandran A, Sugiyama N, Tomita M, Swarup S, and Ishihama Y (2009). Ser/Thr/Tyr phosphoproteome analysis of pathogenic and non-pathogenic Pseudomonas species. Proteomics 9, 2764-2775.
  • Parab GS, Rao R, Lakshminarayanan S, Bing YV, Moochhala SM, and Swarup S (2009). Data-driven optimization of metabolomics methods using rat liver samples. Analytical Chemistry 81, 1315-1323.

  • Benaka Prasad SB, Vinaya K, Ananda Kumar CS, Swarup S, and Rangappa KS (2009). Synthesis of novel 6-fluoro-3-(4-piperidinyl)-1,2-benzisoxazole derivatives as antiproliferative agents: a structure-activity relationship study. Investigational New Drugs 27, 534-542.

  • Ananda Kumar CS, Prasad SB, Vinaya K, Chandrappa S, Thimmegowda NR, Ranganatha SR, Swarup S, and Rangappa KS (2009). Synthesis and antiproliferative activity of substituted diazaspiro hydantoins: a structure-activity relationship study. Investigational New Drugs 27, 131-139.

  • Ananda Kumar CS, Benaka Prasad SB, Vinaya K, Chandrappa S, Thimmegowda NR, Kumar YC, Swarup S, and Rangappa KS (2009). Synthesis and in vitro antiproliferative activity of novel 1-benzhydrylpiperazine derivatives against human cancer cell lines. European Journal of Medicinal Chemistry 44, 1223-1229.

  • Meier S, Gehring C, MacPherson C, Kaur M, Maqungo M, Reuben S, Muyanga S, Shih M-D, Wei F-J, Wanchana S, Mauleon R, Radovanovic A, Bruskiewich R, Tanaka T, Mohanty B, Itoh T, Wing R, Gojobori T, Sasaki T, Swarup S, Hsing Y-i, and Bajic V (2008). The Promoter Signatures in Rice LEA Genes Can Be Used to Build a Co-expressing LEA Gene Network. Rice 1, 177-187.

  • Domadia PN, Bhunia A, Sivaraman J, Swarup S, and Dasgupta D (2008) Berberine targets assembly of Escherichia coli cell division protein FtsZ. Biochemistry 47, 3225-3234.